CDS

Accession Number TCMCG075C10920
gbkey CDS
Protein Id XP_017973428.1
Location complement(join(32524850..32524929,32527624..32527777,32528139..32528261,32528338..32528452,32528587..32528685,32528762..32528814,32529428..32529584,32530044..32530102,32530270..32530337,32530423..32530566,32531239..32531302,32532079..32532129,32532232..32532371,32532480..32532619,32533059..32533144,32533231..32533376,32533502..32533574,32534300..32534375,32534615..32534722,32534874..32534920,32535143..32535188,32535998..32536110,32536207..32536242,32536340..32536543,32537140..32537205))
Gene LOC18606235
GeneID 18606235
Organism Theobroma cacao

Protein

Length 815aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018117939.1
Definition PREDICTED: DNA mismatch repair protein MSH4 isoform X3 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08740        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGACGACGGAGGAGAGAGGTCAAGCTTCGTGATCGGTCTCATCGAGAACAGAGCTAAAGAGGTTGGAGTGGCTGCCTTTGACTTAAGATCAGCTTCTTTGCATCTTTCTCAATACATTGAAACCAGCAGCTCATATCAGAATACAAAAACTTTGCTTCATTTCTATGATCCCATGATGATCATTGTTCCTCCAAACAAACTGGCTCCTGAAGGTATGGTGGGAGTATCAGAACTAGTAGATCGGTTTTATGCTTCAGTCAAGAAGATTGTCATGGCTCGTGGTTGCTTTGATGACACCAAGGGTGCAATGCTGATTAAAAATTTAGCTGTCAGAGAGCCTTCAGCCCTTGGTTTGGATAGTTACTACAAACAGTATTATCTTTGCTTGGCTTCTGCTTCTGCTACAATCAAATGGATAGAAGCAGAGAAAGGTGTTATTGTCACAAATCATTCCTTATCGGTTACTTTTAATGGATCATTTGACCACATGAACATTGATGCTACTAGTGTCCAAAACTTAGAAATTATTGAACCTTTTCATTCTGCACTTTGGGGCACAAACAACAAGAAAAGAAGTCTATTCCACATGCTTAAGACAACAAAAACTGTTGGAGGGACTAGACTTCTTCGTGCCAATCTTTTGCAGCCTTTAAAAGATATCGAAACTATCAATACGCGTCTGGATTGCCTGGATGAGTTGATGAGCAATGAACAGCTATTCTTTGGACTGTCTCAGGTCTTGCGAAAGTTCCCAAAGGAGACTGATAGGGTACTTTGTCATTTCTGCTTCAAGCCAAAGAAAGTAACAAATGAAGTCTTGGTTGTGGAAAACACTAGAAAGAGCCAAATGCTGATATCAAGCATCATTCTTCTCAAAACTGCATTAGATGCCTTGCCGTTACTATCAAAGGTGCTTAAGGATGCAAAAAGTTTTCTTCTTGCAAATGTTTACAAGTCTATATGTGAAAACGAGAAATATGCTGACATTAGAAAGAGAATTGGAGTGGTGATTGATGAAGATGTGCTTCACGCACGGGTTCCTTTTGTTGCCCGCACACAGCAGTGTTTTGCTGTCAAGGCTGGCATTGATGGGCTATTGGATATAGCTCGGAGATCTTTTTGTGATACCAGCGAAGCTATACATAACCTTGCAAACAAGTACCGGGAAGAATTCAAGATGCCGAATCTGAAACTCCCATTTAACAGTAGACAAGGTTTTTACTTTAGCATTCCACAGAAAGACATTCAGGGACAGCTTCCCAGCAAGTTCATTCAGGTTGTGAAACATGGGAATAATGTACATTGTTCAACTTTGGAACTTGCTTCTCTGAATGTCAGAAATAAATCTGCGGCTGGAGAGTGTTATATACGAACAGAAGTTTGCTTGGAAGCCCTAGTTGATACCATAAGGGAGGATATCTCTGTGCTCACACTGCTTGCTGAAGTCCTGTGCCTGTTAGATATGATTGTTAATTCATTTTCTCATACAATATCAACCAAGCCTGTTGACCGATATATTAGGCCAGAATTTACTGATGATGGCCCTCTGGCAATTGATGCTGGTAGACACCCCATCCTAGAAAGCATACACTGTGATTTTGTGCCCAACAACATCTTTATTTCAGAAGCATCAAACATGGTTATTGCAATGGGGCCAAACATGAGCGGGAAGAGCACTTATCTTCAACAAGTGTGTCTCATAGTTATTCTTGCTCAGATTGGTTGCTATGTTCCTGCCCGCTTTGCAACAATTAGAGTAGTTGATCGTATATTTACAAGGATGGGCACAATGGATAATCTTGAATCAAACTCTAGTACGTTTATGACAGAGATGAAAGAGACTGCTTTTGTCATGCAGAATGTCTCCCAAAGGAGTCTGATTGTTATGGATGAACTTGGGAGGGCTACTTCGTCCTCTGATGGATTGGCAATAGCATGGAGCTGCTGTGAACATCTGCTATCACTCACTGCGTATACCATATTTGCTACTCATATGGAGAACTTGTCAGAATTAGCTACCATCTATCCAAATGTGAAAATTCTTCGCTTCGATGTTGATATTAGAAACAGCCGCCTAGATTTTAAGTTTCAACTCAAGGATGGACCAAGGCATGTAGCACACTATGGCCTTCTACTAGCAGAAGTGGCAGGATTACCGAGTTCGGTGATTGAAACAGCCAGAAGCATAACATCAAGGATTACAGACAAGGAAGTGAAGCGAATGGATGTAAACTGCCTGCACTATAATCAAATACAGTTGGCATATCATGTTTCTCAACGACTGATATGCTTGAAGTACTCCAACCATGACGAGGACTCCATCCGGCAGGCATTGCAAAGTCTCAAAGAGAGCTACATTGATGTGTGGGGGAATTTTGGAATCAAACTTGATCAGTCATCAGAGGGATGCGGTAAAACTTCGGCCCAAAGAATTATCGAATGA
Protein:  
MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPMMIIVPPNKLAPEGMVGVSELVDRFYASVKKIVMARGCFDDTKGAMLIKNLAVREPSALGLDSYYKQYYLCLASASATIKWIEAEKGVIVTNHSLSVTFNGSFDHMNIDATSVQNLEIIEPFHSALWGTNNKKRSLFHMLKTTKTVGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTNEVLVVENTRKSQMLISSIILLKTALDALPLLSKVLKDAKSFLLANVYKSICENEKYADIRKRIGVVIDEDVLHARVPFVARTQQCFAVKAGIDGLLDIARRSFCDTSEAIHNLANKYREEFKMPNLKLPFNSRQGFYFSIPQKDIQGQLPSKFIQVVKHGNNVHCSTLELASLNVRNKSAAGECYIRTEVCLEALVDTIREDISVLTLLAEVLCLLDMIVNSFSHTISTKPVDRYIRPEFTDDGPLAIDAGRHPILESIHCDFVPNNIFISEASNMVIAMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMKETAFVMQNVSQRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLTAYTIFATHMENLSELATIYPNVKILRFDVDIRNSRLDFKFQLKDGPRHVAHYGLLLAEVAGLPSSVIETARSITSRITDKEVKRMDVNCLHYNQIQLAYHVSQRLICLKYSNHDEDSIRQALQSLKESYIDVWGNFGIKLDQSSEGCGKTSAQRIIE